Package: metabolyseR
Title: Methods for Pre-Treatment, Data Mining and Correlation Analyses
        of Metabolomics Data
Version: 0.15.4
Authors@R: person("Jasen", "Finch", email = "jsf9@aber.ac.uk", role = c("aut", "cre"))
Description: A tool kit for pre-treatment, modelling, feature selection
        and correlation analyses of metabolomics data.
URL: https://jasenfinch.github.io/metabolyseR/
BugReports: https://github.com/jasenfinch/metabolyseR/issues
biocViews: Metabolomics
Depends: R (>= 3.4.0)
Imports: Hmisc, dplyr, missForest, randomForest, stringr, tibble,
        tidyr, methods, ggplot2, ggthemes, ggdendro, purrr, doFuture,
        e1071, forestControl, crayon, yaml, cli, lubridate, ggrepel,
        patchwork, yardstick, broom, rlang, tidyselect, magrittr,
        furrr, future
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Suggests: knitr, rmarkdown, readr, testthat, metaboData, prettydoc,
        covr, kableExtra
Collate: all-classes.R analysis-accessors.R aggregate.R analysisData.R
        correction.R correlations.R impute.R info.R join.R keep.R mds.R
        metabolyse.R metabolyseR.R modelling.R modelling-plots.R nlda.R
        occupancy.R parameters.R plotExplanatoryHeatmap.R plotFeature.R
        plotLDA.R plotOccupancy.R plotPCA.R plotRSD.R
        plotSupervisedRF.R plotTIC.R plotting.R plotUnsupervisedRF.R
        pre-treatment.R predict.R QC.R reexports.R remove.R
        randomForest-permute.R randomForest-classification.R
        randomForest-regression.R randomForest-internals.R
        randomForest-unsupervised.R randomForest.R rsd.R roc.R
        show-method.R split.R transform.R tune.R univariate.R
        modelling-accessors.R
VignetteBuilder: knitr
Remotes: jasenfinch/missForest
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev
Repository: https://aberhrml.r-universe.dev
Date/Publication: 2023-09-12 15:01:48 UTC
RemoteUrl: https://github.com/aberHRML/metabolyseR
RemoteRef: HEAD
RemoteSha: 08bb28b7d2bb733e675a0a9fd88509b4b8241398
NeedsCompilation: no
Packaged: 2026-06-16 09:35:52 UTC; root
Author: Jasen Finch [aut, cre]
Maintainer: Jasen Finch <jsf9@aber.ac.uk>